PHYLOViZ is available as a desktop JAVA
application and also as an online
application. It allows the analysis of sequence-based typing methods that generate
allelic profiles and their associated epidemiological data.
All PHYLOViZ code is available in public repositories and under GPL license. Click in development
above to explore it.
For representing the possible evolutionary relationships between strains, PHYLOViZ uses the
goeBURST algorithm, a refinement
of eBURST algorithm by Feil et al.,
and its expansion to generate a complete minimum spanning tree (MST).
Partly supported by INCD funded by FCT and FEDER under the project 22153-01/SAICT/2016, by other national
funds also through FCT (BACGENTRACK TUBITAK/0004/2014, DATASTORM EXCL/EEI-ESS/0257/2012, NETDYN
PTDC/EIA-CCO/118533/2010), and by EC funded projects (BIRDS 690941-H2020-MSCA-RISE-2015,